Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_02365 | Not Available | Positive | 600493 - 601893 | 52376.5 |
| hypothetical protein | DWY53_02370 | Not Available | Positive | 601937 - 603511 | 58686.1 |
| duf4421 domain-containing protein | DWY53_02375 | Not Available | Negative | 603584 - 604711 | 43164.2 |
| gfo/idh/moca family oxidoreductase | DWY53_02380 | Not Available | Negative | 604721 - 605710 | 36847.1 |
| glutamine abc transporter substrate-binding protein | DWY53_02385 | Not Available | Negative | 605799 - 606617 | 30961.1 |
| hypothetical protein | DWY53_02390 | Not Available | Negative | 606626 - 608737 | 80812.3 |
| hypothetical protein | DWY53_02395 | Not Available | Positive | 608649 - 608837 | 7558.39 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit gamma | DWY53_02400 | Not Available | Negative | 608831 - 609373 | 19888.6 |
| 2-oxoglutarate oxidoreductase | DWY53_02405 | Not Available | Negative | 609387 - 610151 | 27912.9 |
| hypothetical protein | DWY53_02410 | Not Available | Negative | 610170 - 610337 | 6434.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

