Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF25-30LB
Accession NumberQRUD00000000.1
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| prtrc system protein b | DWY53_00025 | Not Available | - | 2455 - 3156 | 26858.6 |
| peptidase | DWY53_00030 | Not Available | - | 3162 - 4271 | 44010.9 |
| prtrc system protein c | DWY53_00035 | Not Available | - | 4308 - 4529 | 8301.03 |
| prtrc system protein e | DWY53_00040 | Not Available | - | 4574 - 5635 | 39741.0 |
| hypothetical protein | DWY53_00045 | Not Available | - | 5654 - 5863 | 8037.63 |
| hypothetical protein | DWY53_00050 | Not Available | - | 5882 - 6097 | 7845.56 |
| dna topoisomerase iii | DWY53_00055 | Not Available | - | 6390 - 8159 | 66643.1 |
| duf4099 domain-containing protein | DWY53_00060 | Not Available | - | 8235 - 8495 | 9588.35 |
| duf3945 domain-containing protein | DWY53_00065 | Not Available | - | 8549 - 10366 | 69063.8 |
| hypothetical protein | DWY53_00070 | Not Available | - | 10683 - 10985 | 11300.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
