Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_24515 | Not Available | Negative | 5399758 - 5400416 | 25169.6 |
| hypothetical protein | DWY53_24520 | Not Available | Positive | 5400417 - 5400769 | 13490.7 |
| hypothetical protein | DWY53_24525 | Not Available | Positive | 5400760 - 5401073 | 11925.1 |
| dna-binding protein | DWY53_24530 | Not Available | Positive | 5401075 - 5401374 | 11590.3 |
| dna-binding protein | DWY53_24535 | Not Available | Positive | 5401358 - 5401454 | 3738.3 |
| dna-binding protein | DWY53_24540 | Not Available | Positive | 5401479 - 5401706 | 8830.6 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DWY53_24545 | Not Available | Negative | 5401707 - 5402333 | 22685.8 |
| tetr/acrr family transcriptional regulator | DWY53_24550 | Not Available | Positive | 5402677 - 5402958 | 11116.6 |
| hypothetical protein | DWY53_24560 | Not Available | Positive | 5404160 - 5404755 | 22259.6 |
| methyltransferase domain-containing protein | DWY53_24565 | Not Available | Negative | 5404759 - 5405346 | 22286.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

