Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DWY53_24440 | Not Available | Negative | 5390923 - 5391021 | 3844.73 |
| molybdenum abc transporter atp-binding protein | DWY53_24455 | Not Available | Positive | 5391690 - 5391817 | 4742.79 |
| is982 family transposase | DWY53_24460 | Not Available | Negative | 5391832 - 5392617 | 30080.2 |
| tolc family protein | DWY53_24465 | Not Available | Positive | 5392707 - 5393594 | 31683.0 |
| dna methylase | DWY53_24470 | Not Available | Positive | 5393595 - 5394480 | 33895.3 |
| hypothetical protein | DWY53_24480 | Not Available | Positive | 5395577 - 5395981 | 15303.8 |
| para family protein | DWY53_24485 | Not Available | Negative | 5396368 - 5396957 | 22236.9 |
| acetyl-coa carboxylase biotin carboxylase subunit | DWY53_24495 | Not Available | Positive | 5397693 - 5398403 | 27488.1 |
| response regulator | DWY53_24505 | Not Available | Negative | 5399085 - 5399327 | 9355.46 |
| hybrid sensor histidine kinase/response regulator | DWY53_24510 | Not Available | Negative | 5399320 - 5399757 | 16232.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

