Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_24390 | Not Available | Positive | 5385825 - 5386061 | 9060.05 |
| hypothetical protein | DWY53_24395 | Not Available | Positive | 5386314 - 5386888 | 20437.1 |
| hypothetical protein | DWY53_24400 | Not Available | Positive | 5387027 - 5387246 | 8346.61 |
| cell surface protein | DWY53_24405 | Not Available | Negative | 5387247 - 5387835 | 20598.3 |
| arac family transcriptional regulator | DWY53_24410 | Not Available | Negative | 5387940 - 5388177 | 9005.92 |
| glycoside hydrolase | DWY53_24415 | Not Available | Positive | 5388178 - 5388495 | 12292.0 |
| hypothetical protein | DWY53_24420 | Not Available | Negative | 5388860 - 5389106 | 9744.55 |
| conjugative transposon protein traj | DWY53_24425 | Not Available | Positive | 5389107 - 5389514 | 14514.8 |
| conjugative transposon protein trak | DWY53_24430 | Not Available | Positive | 5389546 - 5390015 | 18196.8 |
| is982 family transposase | DWY53_24435 | Not Available | Negative | 5390016 - 5390833 | 31828.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

