Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_24275 | Not Available | Negative | 5370859 - 5371239 | 14717.3 |
| trag family conjugative transposon atpase | DWY53_24280 | Not Available | Negative | 5371303 - 5372574 | 48574.1 |
| pcfk-like protein | DWY53_24285 | Not Available | Negative | 5372575 - 5372732 | 6176.34 |
| hypothetical protein | DWY53_24290 | Not Available | Negative | 5372749 - 5372964 | 7903.15 |
| molybdenum abc transporter atp-binding protein | DWY53_24295 | Not Available | Negative | 5372972 - 5373307 | 13019.6 |
| hypothetical protein | DWY53_24310 | Not Available | Negative | 5373809 - 5374988 | 43977.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWY53_24320 | Not Available | Positive | 5376112 - 5377213 | 41082.3 |
| dde transposase | DWY53_24325 | Not Available | Negative | 5377214 - 5378069 | 33336.1 |
| transposase family protein | DWY53_24330 | Not Available | Negative | 5378156 - 5378312 | 6111.08 |
| type ia dna topoisomerase | DWY53_24335 | Not Available | Positive | 5378313 - 5379373 | 39545.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

