Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_02160 | Not Available | Positive | 554270 - 554800 | 20088.5 |
| n-acetylmuramoyl-l-alanine amidase | DWY53_02165 | Not Available | Negative | 554813 - 555226 | 15328.6 |
| dna-binding protein | DWY53_02170 | Not Available | Negative | 555376 - 555849 | 16817.1 |
| duf4248 domain-containing protein | DWY53_02175 | Not Available | Positive | 556130 - 556369 | 9222.05 |
| toprim domain-containing protein | DWY53_02180 | Not Available | Negative | 556478 - 558484 | 74866.9 |
| hypothetical protein | DWY53_02185 | Not Available | Negative | 558569 - 559636 | 39872.6 |
| hypothetical protein | DWY53_02190 | Not Available | Positive | 559635 - 559910 | 10400.9 |
| polysaccharide pyruvyl transferase family protein | DWY53_02195 | Not Available | Positive | 560086 - 561195 | 43113.8 |
| glycosyltransferase | DWY53_02200 | Not Available | Positive | 561213 - 562169 | 36987.5 |
| glycosyl transferase | DWY53_02205 | Not Available | Positive | 562188 - 562964 | 29751.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

