Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-1-phosphate guanylyltransferase | DWY53_24155 | Not Available | Positive | 5351613 - 5352656 | 39523.2 |
| hypothetical protein | DWY53_24160 | Not Available | Positive | 5352772 - 5353353 | 22236.5 |
| type iv secretion protein rhs | DWY53_24170 | Not Available | Negative | 5354388 - 5355492 | 41132.8 |
| type vi secretion system needle protein hcp | DWY53_24175 | Not Available | Negative | 5355610 - 5356008 | 15197.9 |
| duf2958 domain-containing protein | DWY53_24180 | Not Available | Positive | 5356298 - 5356627 | 12461.0 |
| hypothetical protein | DWY53_24185 | Not Available | Positive | 5356692 - 5357285 | 22812.4 |
| hypothetical protein | DWY53_24190 | Not Available | Positive | 5357327 - 5357560 | 9261.27 |
| hypothetical protein | DWY53_24200 | Not Available | Negative | 5357861 - 5358700 | 32225.6 |
| is1380 family transposase is615 | DWY53_24205 | Not Available | Positive | 5359434 - 5360720 | 49287.3 |
| hypothetical protein | DWY53_24210 | Not Available | Positive | 5360892 - 5361083 | 7356.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

