Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat protein | DWY53_24100 | Not Available | Negative | 5343985 - 5345840 | 69993.1 |
| conjugal transfer protein trao | DWY53_24105 | Not Available | Positive | 5345868 - 5346362 | 18063.5 |
| dna primase | DWY53_24110 | Not Available | Positive | 5346371 - 5347261 | 33514.1 |
| duf3872 domain-containing protein | DWY53_24115 | Not Available | Positive | 5347273 - 5347607 | 12710.4 |
| conjugal transfer protein | DWY53_24120 | Not Available | Positive | 5347608 - 5347889 | 11002.9 |
| hypothetical protein | DWY53_24125 | Not Available | Positive | 5347883 - 5348629 | 27997.1 |
| hypothetical protein | DWY53_24130 | Not Available | Positive | 5348691 - 5349331 | 24129.0 |
| duf3876 domain-containing protein | DWY53_24135 | Not Available | Positive | 5349477 - 5349860 | 14460.4 |
| conjugative transposon protein traj | DWY53_24145 | Not Available | Positive | 5350555 - 5351054 | 18916.3 |
| Trna-leu | Not Available | Not Available | Positive | 5351342 - 5351428 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

