Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_23985 | Not Available | Negative | 5328815 - 5329030 | 7911.55 |
| site-specific integrase | DWY53_23990 | Not Available | Negative | 5329626 - 5330786 | 44958.7 |
| hypothetical protein | DWY53_23995 | Not Available | Positive | 5331154 - 5331374 | 7666.67 |
| tetr/acrr family transcriptional regulator | DWY53_24000 | Not Available | Positive | 5331802 - 5332443 | 25286.9 |
| 3-oxoacyl-acp synthase | DWY53_24005 | Not Available | Positive | 5332448 - 5333556 | 41475.3 |
| tolc family protein | DWY53_24010 | Not Available | Negative | 5333557 - 5334725 | 42540.1 |
| acrb/acrd/acrf family protein | DWY53_24015 | Not Available | Negative | 5334726 - 5335676 | 34045.8 |
| dna-binding protein | DWY53_24020 | Not Available | Positive | 5335677 - 5335755 | 2773.4 |
| rhum protein | DWY53_24025 | Not Available | Negative | 5335833 - 5336195 | 13614.5 |
| site-specific integrase | DWY53_24030 | Not Available | Negative | 5336207 - 5337442 | 47922.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

