Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | DWY53_23865 | Not Available | Positive | 5309060 - 5309595 | 19778.1 |
| hypothetical protein | DWY53_23870 | Not Available | Positive | 5309596 - 5312124 | 95529.0 |
| dna methylase | DWY53_23875 | Not Available | Negative | 5312125 - 5312264 | 5460.37 |
| group ii intron reverse transcriptase/maturase | DWY53_23880 | Not Available | Negative | 5312248 - 5313915 | 64496.6 |
| hypothetical protein | DWY53_23885 | Not Available | Negative | 5313881 - 5314084 | 7680.18 |
| glycosyl hydrolase | DWY53_23890 | Not Available | Positive | 5314596 - 5315844 | 47256.9 |
| fimbrillin family protein | DWY53_23895 | Not Available | Negative | 5316131 - 5317051 | 35552.7 |
| group ii intron reverse transcriptase/maturase | DWY53_23900 | Not Available | Positive | 5317694 - 5319340 | 63557.3 |
| trag family conjugative transposon atpase | DWY53_23905 | Not Available | Positive | 5319349 - 5319463 | 4445.36 |
| atp-dependent clp protease atp-binding subunit | DWY53_23910 | Not Available | Positive | 5319464 - 5321184 | 64484.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

