Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group ii intron reverse transcriptase/maturase | DWY53_23810 | Not Available | Positive | 5297449 - 5298744 | 49863.2 |
| hypothetical protein | DWY53_23815 | Not Available | Positive | 5299125 - 5299336 | 8271.15 |
| hypothetical protein | DWY53_23820 | Not Available | Positive | 5299423 - 5299746 | 12382.6 |
| transposase | DWY53_23825 | Not Available | Positive | 5299739 - 5300107 | 14435.6 |
| is66 family transposase | DWY53_23830 | Not Available | Positive | 5300195 - 5301820 | 62903.9 |
| hypothetical protein | DWY53_23835 | Not Available | Positive | 5302008 - 5303363 | 49764.9 |
| hypothetical protein | DWY53_23840 | Not Available | Positive | 5303494 - 5304505 | 37565.6 |
| hypothetical protein | DWY53_23845 | Not Available | Positive | 5304582 - 5304986 | 14911.8 |
| is66 family transposase | DWY53_23855 | Not Available | Positive | 5305464 - 5307029 | 60510.3 |
| helicase | DWY53_23860 | Not Available | Positive | 5307064 - 5308241 | 43880.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

