Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_02110 | Not Available | Positive | 538882 - 539703 | 31598.5 |
| tetratricopeptide repeat protein | DWY53_02115 | Not Available | Negative | 539695 - 541872 | 86032.4 |
| duf418 domain-containing protein | DWY53_02120 | Not Available | Negative | 541934 - 543118 | 45032.6 |
| transcription-repair coupling factor | DWY53_02125 | Not Available | Positive | 543226 - 546591 | 127080.0 |
| tonb family protein | DWY53_02130 | Not Available | Positive | 546856 - 547542 | 25606.7 |
| transcriptional regulator | DWY53_02135 | Not Available | Positive | 548129 - 548959 | 31555.8 |
| lipopolysaccharide biosynthesis protein | DWY53_02140 | Not Available | Positive | 549349 - 550884 | 57381.3 |
| glycosyltransferase family 2 protein | DWY53_02145 | Not Available | Positive | 550887 - 551987 | 42322.1 |
| 4fe-4s dicluster domain-containing protein | DWY53_02150 | Not Available | Positive | 551968 - 553212 | 47102.8 |
| hypothetical protein | DWY53_02155 | Not Available | Positive | 553275 - 554270 | 37534.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

