Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_23565 | Not Available | Negative | 5257582 - 5258148 | 21759.5 |
| glycoside hydrolase | DWY53_23570 | Not Available | Negative | 5258167 - 5260251 | 78424.4 |
| ragb/susd family nutrient uptake outer membrane protein | DWY53_23575 | Not Available | Negative | 5260343 - 5261026 | 25860.7 |
| hypothetical protein | DWY53_23580 | Not Available | Negative | 5261292 - 5261660 | 14217.2 |
| translation initiation factor 2 | DWY53_23585 | Not Available | Negative | 5261667 - 5262563 | 33822.0 |
| hypothetical protein | DWY53_23590 | Not Available | Negative | 5262578 - 5263117 | 20863.2 |
| m23 family peptidase | DWY53_23595 | Not Available | Negative | 5263111 - 5263734 | 23049.5 |
| hypothetical protein | DWY53_23600 | Not Available | Negative | 5264052 - 5264484 | 16286.7 |
| aaa family atpase | DWY53_23610 | Not Available | Negative | 5264863 - 5266464 | 60840.3 |
| hypothetical protein | DWY53_23620 | Not Available | Negative | 5267105 - 5267656 | 21022.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

