Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_23515 | Not Available | Positive | 5249035 - 5250162 | 40744.3 |
| conjugative transposon protein trak | DWY53_23520 | Not Available | Positive | 5250182 - 5250381 | 7529.36 |
| lysm peptidoglycan-binding domain-containing protein | DWY53_23525 | Not Available | Negative | 5250429 - 5251325 | 35105.5 |
| hypothetical protein | DWY53_23530 | Not Available | Negative | 5251431 - 5252072 | 24603.2 |
| hypothetical protein | DWY53_23535 | Not Available | Negative | 5252228 - 5252776 | 21482.5 |
| hypothetical protein | DWY53_23540 | Not Available | Negative | 5252798 - 5253160 | 13705.4 |
| rna polymerase sigma factor | DWY53_23545 | Not Available | Negative | 5253168 - 5253704 | 21672.0 |
| hypothetical protein | DWY53_23550 | Not Available | Positive | 5254175 - 5255413 | 47660.4 |
| duf3869 domain-containing protein | DWY53_23555 | Not Available | Positive | 5255424 - 5256272 | 30480.6 |
| ompa family protein | DWY53_23560 | Not Available | Positive | 5256316 - 5257410 | 39303.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

