Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf418 domain-containing protein | DWY53_23465 | Not Available | Negative | 5240692 - 5241000 | 11933.8 |
| nuclear transport factor 2 family protein | DWY53_23470 | Not Available | Positive | 5241089 - 5241466 | 14256.0 |
| gnat family n-acetyltransferase | DWY53_23475 | Not Available | Positive | 5241478 - 5242335 | 32371.6 |
| hlyd family efflux transporter periplasmic adaptor subunit | DWY53_23480 | Not Available | Negative | 5242731 - 5243978 | 46548.9 |
| hypothetical protein | DWY53_23485 | Not Available | Positive | 5244273 - 5244782 | 19798.7 |
| is66-like element isbvu4 family transposase | DWY53_23490 | Not Available | Positive | 5244851 - 5246464 | 61911.8 |
| conjugal transfer protein | DWY53_23495 | Not Available | Positive | 5246564 - 5246845 | 11002.9 |
| hypothetical protein | DWY53_23500 | Not Available | Positive | 5246839 - 5247579 | 27752.8 |
| hypothetical protein | DWY53_23505 | Not Available | Positive | 5247645 - 5248298 | 24408.3 |
| duf5045 domain-containing protein | DWY53_23510 | Not Available | Positive | 5248288 - 5248974 | 26921.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

