Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysozyme | DWY53_23400 | Not Available | Negative | 5229231 - 5229533 | 11630.5 |
| hypothetical protein | DWY53_23410 | Not Available | Negative | 5229895 - 5230974 | 40814.7 |
| s9 family peptidase | DWY53_23415 | Not Available | Negative | 5231208 - 5232245 | 39546.7 |
| ragb/susd family nutrient uptake outer membrane protein | DWY53_23420 | Not Available | Negative | 5232278 - 5233720 | 53754.5 |
| fimbrillin family protein | DWY53_23430 | Not Available | Negative | 5234028 - 5234962 | 34839.2 |
| hypothetical protein | DWY53_23435 | Not Available | Negative | 5235033 - 5235311 | 10789.1 |
| para family protein | DWY53_23440 | Not Available | Negative | 5235327 - 5236124 | 29627.2 |
| hypothetical protein | DWY53_23445 | Not Available | Positive | 5236623 - 5236865 | 9651.65 |
| dna adenine methylase | DWY53_23450 | Not Available | Positive | 5236957 - 5237796 | 32486.7 |
| hypothetical protein | DWY53_23455 | Not Available | Positive | 5237940 - 5238321 | 13884.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

