Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketoacyl-acp synthase iii | DWY53_23350 | Not Available | Negative | 5222783 - 5223787 | 36862.4 |
| 50s ribosomal protein l32 | DWY53_23355 | Not Available | Negative | 5223892 - 5224077 | 6838.3 |
| duf177 domain-containing protein | DWY53_23360 | Not Available | Negative | 5224089 - 5224622 | 19819.5 |
| pcfj-like protein | DWY53_23365 | Not Available | Positive | 5225036 - 5225989 | 36913.2 |
| hypothetical protein | DWY53_23370 | Not Available | Positive | 5226014 - 5226271 | 10305.4 |
| duf3873 domain-containing protein | DWY53_23375 | Not Available | Positive | 5226294 - 5226524 | 8822.52 |
| hypothetical protein | DWY53_23380 | Not Available | Positive | 5226464 - 5226769 | 11318.2 |
| hypothetical protein | DWY53_23385 | Not Available | Positive | 5226823 - 5227131 | 11835.4 |
| methionine adenosyltransferase | DWY53_23390 | Not Available | Negative | 5227234 - 5228292 | 39498.1 |
| hypothetical protein | DWY53_23395 | Not Available | Negative | 5228279 - 5229070 | 30926.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

