Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosine kinase | DWY53_23290 | Not Available | Positive | 5206644 - 5207630 | 35280.9 |
| pdz domain-containing protein | DWY53_23295 | Not Available | Positive | 5207674 - 5209368 | 63106.7 |
| virulence-associated protein e | DWY53_23305 | Not Available | Negative | 5211212 - 5212363 | 45299.6 |
| hypothetical protein | DWY53_23310 | Not Available | Negative | 5212469 - 5212675 | 7958.76 |
| dna-binding protein | DWY53_23315 | Not Available | Positive | 5212677 - 5213315 | 24089.6 |
| glpgli family protein | DWY53_23320 | Not Available | Positive | 5213394 - 5215100 | 63473.1 |
| tonb-dependent receptor | DWY53_23330 | Not Available | Positive | 5215669 - 5218641 | 110189.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWY53_23335 | Not Available | Positive | 5218665 - 5220251 | 58810.6 |
| ribosome biogenesis gtpase der | DWY53_23340 | Not Available | Negative | 5220472 - 5221785 | 49388.4 |
| gtpase era | DWY53_23345 | Not Available | Negative | 5221819 - 5222700 | 33673.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

