Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | DWY53_23235 | Not Available | Negative | 5198383 - 5198892 | 19446.2 |
| fha domain-containing protein | DWY53_23240 | Not Available | Negative | 5198897 - 5199421 | 19818.0 |
| spor domain-containing protein | DWY53_23245 | Not Available | Negative | 5199437 - 5200567 | 42083.4 |
| hypothetical protein | DWY53_23250 | Not Available | Positive | 5200814 - 5201113 | 11716.9 |
| hypothetical protein | DWY53_23255 | Not Available | Positive | 5201088 - 5201669 | 22509.9 |
| invertase | DWY53_23260 | Not Available | Negative | 5202510 - 5203121 | 23063.3 |
| glycoside hydrolase family 127 protein | DWY53_23265 | Not Available | Positive | 5203500 - 5205892 | 89624.2 |
| Trna-asn | Not Available | Not Available | Positive | 5206292 - 5206365 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 5206391 - 5206464 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 5206490 - 5206563 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

