Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent dna methyltransferase | DWY53_23170 | Not Available | Positive | 5187978 - 5189792 | 69548.6 |
| n-6 dna methylase | DWY53_23175 | Not Available | Positive | 5189789 - 5190124 | 12479.8 |
| hypothetical protein | DWY53_23180 | Not Available | Negative | 5190178 - 5190357 | 6888.54 |
| hypothetical protein | DWY53_23190 | Not Available | Negative | 5191125 - 5191376 | 9377.15 |
| hypothetical protein | DWY53_23195 | Not Available | Positive | 5191783 - 5192535 | 26781.6 |
| hypothetical protein | DWY53_23205 | Not Available | Positive | 5193330 - 5193635 | 10691.7 |
| duf1622 domain-containing protein | DWY53_23215 | Not Available | Negative | 5195668 - 5196009 | 12539.8 |
| alpha-ribazole phosphatase | DWY53_23220 | Not Available | Negative | 5196061 - 5196591 | 20094.8 |
| adenosylcobinamide-gdp ribazoletransferase | DWY53_23225 | Not Available | Negative | 5196585 - 5197334 | 27738.7 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | DWY53_23230 | Not Available | Negative | 5197337 - 5198374 | 37449.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

