Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component system sensor kinase | DWY53_23070 | Not Available | Negative | 5171542 - 5172075 | 20716.5 |
| tetracycline resistance ribosomal protection protein | DWY53_23075 | Not Available | Negative | 5172075 - 5172631 | 20871.0 |
| abc transporter permease | DWY53_23080 | Not Available | Negative | 5173612 - 5176032 | 91819.4 |
| abc transporter atp-binding protein | DWY53_23085 | Not Available | Negative | 5176032 - 5176742 | 26379.0 |
| efflux rnd transporter periplasmic adaptor subunit | DWY53_23090 | Not Available | Negative | 5176758 - 5178008 | 47799.6 |
| tolc family protein | DWY53_23095 | Not Available | Negative | 5178014 - 5179080 | 41740.3 |
| duf3876 domain-containing protein | DWY53_23100 | Not Available | Positive | 5179233 - 5179523 | 11090.6 |
| duf3876 domain-containing protein | DWY53_23105 | Not Available | Positive | 5179534 - 5179849 | 12055.2 |
| duf4141 domain-containing protein | DWY53_23110 | Not Available | Positive | 5179876 - 5180505 | 24143.2 |
| conjugative transposon protein traj | DWY53_23115 | Not Available | Positive | 5180509 - 5181513 | 37228.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

