Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nyn domain-containing protein | DWY53_22905 | Not Available | Negative | 5147488 - 5148192 | 26421.8 |
| dna-binding protein | DWY53_22910 | Not Available | Negative | 5148215 - 5148541 | 12711.4 |
| phosphoribosyltransferase | DWY53_22915 | Not Available | Negative | 5148780 - 5149691 | 34982.3 |
| dna-binding protein | DWY53_22920 | Not Available | Positive | 5149821 - 5150114 | 11497.0 |
| dna-binding protein | DWY53_22925 | Not Available | Positive | 5150111 - 5150413 | 11970.6 |
| hypothetical protein | DWY53_22930 | Not Available | Positive | 5150400 - 5150588 | 7526.43 |
| hypothetical protein | DWY53_22935 | Not Available | Negative | 5150521 - 5150727 | 7996.78 |
| duf4121 family protein | DWY53_22940 | Not Available | Positive | 5150762 - 5151541 | 30595.2 |
| dna primase | DWY53_22945 | Not Available | Negative | 5151642 - 5152505 | 33034.9 |
| rhs repeat protein | DWY53_22950 | Not Available | Negative | 5152653 - 5153692 | 36355.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

