Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_22855 | Not Available | Negative | 5135504 - 5136025 | 20006.4 |
| duf1911 domain-containing protein | DWY53_22860 | Not Available | Negative | 5136050 - 5136805 | 29635.5 |
| cytosolic protein | DWY53_22865 | Not Available | Negative | 5136823 - 5137551 | 27535.9 |
| hypothetical protein | DWY53_22870 | Not Available | Negative | 5137710 - 5138055 | 13936.8 |
| hypothetical protein | DWY53_22875 | Not Available | Negative | 5138080 - 5138913 | 32223.6 |
| susc/raga family tonb-linked outer membrane protein | DWY53_22880 | Not Available | Positive | 5138965 - 5142225 | 119886.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWY53_22885 | Not Available | Positive | 5142261 - 5144120 | 70276.5 |
| aaa family atpase | DWY53_22890 | Not Available | Positive | 5144446 - 5145639 | 45849.4 |
| prtrc system protein b | DWY53_22895 | Not Available | Positive | 5145930 - 5146631 | 26921.0 |
| prtrc system thif family protein | DWY53_22900 | Not Available | Positive | 5146628 - 5147407 | 28999.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

