Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudohemocyanin | DWY53_22640 | Not Available | Negative | 5086700 - 5087680 | 38275.3 |
| hypothetical protein | DWY53_22645 | Not Available | Negative | 5087788 - 5088291 | 19547.2 |
| atp-binding protein | DWY53_22650 | Not Available | Negative | 5088288 - 5089520 | 46845.8 |
| hypothetical protein | DWY53_22655 | Not Available | Negative | 5089705 - 5091978 | 88788.9 |
| hypothetical protein | DWY53_22660 | Not Available | Negative | 5092019 - 5092645 | 24543.1 |
| rhs repeat protein | DWY53_22665 | Not Available | Negative | 5092648 - 5094315 | 64727.5 |
| dna methylase | DWY53_22670 | Not Available | Positive | 5094364 - 5095314 | 35576.5 |
| ntpase | DWY53_22675 | Not Available | Negative | 5095579 - 5097444 | 71613.1 |
| hypothetical protein | DWY53_22685 | Not Available | Negative | 5097626 - 5098015 | 14870.0 |
| hypothetical protein | DWY53_22690 | Not Available | Positive | 5098445 - 5099200 | 28988.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

