Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_22580 | Not Available | Positive | 5074162 - 5074383 | 8588.52 |
| hypothetical protein | DWY53_22585 | Not Available | Negative | 5074380 - 5075495 | 42026.7 |
| hypothetical protein | DWY53_22590 | Not Available | Negative | 5075584 - 5078712 | 117272.0 |
| helix-turn-helix domain-containing protein | DWY53_22595 | Not Available | Negative | 5078812 - 5079058 | 9192.14 |
| xre family transcriptional regulator | DWY53_22605 | Not Available | Negative | 5080175 - 5080483 | 11760.3 |
| hypothetical protein | DWY53_22610 | Not Available | Negative | 5080772 - 5082088 | 51345.6 |
| metallophosphatase | DWY53_22615 | Not Available | Negative | 5082097 - 5082867 | 30106.6 |
| metallophosphatase | DWY53_22620 | Not Available | Negative | 5082872 - 5083456 | 22621.9 |
| hypothetical protein | DWY53_22625 | Not Available | Negative | 5083973 - 5084620 | 24731.6 |
| hypothetical protein | DWY53_22630 | Not Available | Negative | 5084625 - 5085713 | 41279.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

