Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_02010 | Not Available | Negative | 514506 - 515546 | 41748.6 |
| duf1016 family protein | DWY53_02015 | Not Available | Negative | 515552 - 516850 | 49456.0 |
| site-specific integrase | DWY53_02020 | Not Available | Negative | 516918 - 518201 | 50423.2 |
| dna polymerase iii subunit gamma/tau | DWY53_02025 | Not Available | Negative | 518736 - 520547 | 67537.0 |
| septum formation initiator family protein | DWY53_02030 | Not Available | Positive | 520666 - 520962 | 11882.5 |
| hypothetical protein | DWY53_02035 | Not Available | Positive | 520986 - 521303 | 12033.2 |
| s46 family peptidase | DWY53_02040 | Not Available | Negative | 521421 - 523607 | 82680.6 |
| s46 family peptidase | DWY53_02045 | Not Available | Negative | 523607 - 525772 | 81202.0 |
| duf4369 domain-containing protein | DWY53_02050 | Not Available | Positive | 525987 - 526664 | 25343.6 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DWY53_02055 | Not Available | Negative | 526679 - 527437 | 28645.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

