Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_22530 | Not Available | Negative | 5062523 - 5062909 | 14311.4 |
| Trna-thr | Not Available | Not Available | Positive | 5063103 - 5063176 | Not Available |
| molecular chaperone groel | DWY53_22540 | Not Available | Negative | 5063424 - 5065061 | 58147.1 |
| co-chaperone groes | DWY53_22545 | Not Available | Negative | 5065103 - 5065375 | 9740.92 |
| 4fe-4s dicluster domain-containing protein | DWY53_22550 | Not Available | Positive | 5065756 - 5067222 | 54223.4 |
| [fefe] hydrogenase h-cluster radical sam maturase hyde | DWY53_22555 | Not Available | Positive | 5067231 - 5068265 | 38858.7 |
| [fefe] hydrogenase h-cluster radical sam maturase hydg | DWY53_22560 | Not Available | Positive | 5068278 - 5069696 | 53347.0 |
| [fefe] hydrogenase h-cluster maturation gtpase hydf | DWY53_22565 | Not Available | Positive | 5069760 - 5070950 | 43940.6 |
| fimbrillin family protein | DWY53_22570 | Not Available | Negative | 5071214 - 5072206 | 37128.1 |
| aaa family atpase | DWY53_22575 | Not Available | Negative | 5072504 - 5074114 | 62418.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

