Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar protein flgn | DWY53_22455 | Not Available | Negative | 5044092 - 5045936 | 70189.1 |
| hypothetical protein | DWY53_22460 | Not Available | Negative | 5045944 - 5046135 | 7356.9 |
| is1182 family transposase | DWY53_22470 | Not Available | Positive | 5048526 - 5050181 | 65387.9 |
| hypothetical protein | DWY53_22480 | Not Available | Positive | 5051535 - 5053148 | 60890.3 |
| hypothetical protein | DWY53_22485 | Not Available | Negative | 5053276 - 5054589 | 47438.9 |
| hypothetical protein | DWY53_22490 | Not Available | Negative | 5054639 - 5055204 | 21585.2 |
| hypothetical protein | DWY53_22495 | Not Available | Negative | 5055231 - 5056184 | 36563.9 |
| hypothetical protein | DWY53_22515 | Not Available | Negative | 5059897 - 5060370 | 17895.8 |
| conjugative transposon protein tran | DWY53_22520 | Not Available | Negative | 5060374 - 5061261 | 34107.9 |
| conjugative transposon protein tram | DWY53_22525 | Not Available | Negative | 5061315 - 5062526 | 45436.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

