Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_22295 | Not Available | Negative | 5001856 - 5002242 | 14302.5 |
| dna helicase recq | DWY53_22300 | Not Available | Negative | 5002309 - 5004126 | 69130.0 |
| arac family transcriptional regulator | DWY53_22305 | Not Available | Positive | 5004458 - 5004925 | 18149.8 |
| dihydrofolate reductase | DWY53_22310 | Not Available | Positive | 5005031 - 5007043 | 76580.1 |
| dna alkylation repair protein | DWY53_22315 | Not Available | Positive | 5007052 - 5007720 | 25716.3 |
| transcriptional repressor | DWY53_22320 | Not Available | Positive | 5007751 - 5008242 | 19166.0 |
| adenylosuccinate synthase | DWY53_22325 | Not Available | Positive | 5008259 - 5009530 | 46850.9 |
| dna repair protein reco | DWY53_22335 | Not Available | Negative | 5011516 - 5012241 | 28652.8 |
| Trna-glu | Not Available | Not Available | Positive | 5012485 - 5012559 | Not Available |
| 30s ribosomal protein s20 | DWY53_22345 | Not Available | Positive | 5012599 - 5012853 | 9698.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

