Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidoligase enzyme | DWY53_22120 | Not Available | Positive | 4959939 - 4960886 | 36149.4 |
| hypothetical protein | DWY53_22125 | Not Available | Positive | 4960892 - 4961128 | 8989.6 |
| hypothetical protein | DWY53_22130 | Not Available | Negative | 4961250 - 4961501 | 9205.81 |
| aaa family atpase | DWY53_22140 | Not Available | Positive | 4963237 - 4964010 | 29628.1 |
| thiamine-phosphate kinase | DWY53_22145 | Not Available | Negative | 4964233 - 4965273 | 38257.9 |
| purine-nucleoside phosphorylase | DWY53_22150 | Not Available | Negative | 4965278 - 4966087 | 29940.3 |
| tetraacyldisaccharide 4'-kinase | DWY53_22155 | Not Available | Negative | 4966050 - 4967150 | 42222.5 |
| signal peptide peptidase sppa | DWY53_22160 | Not Available | Negative | 4967158 - 4968939 | 65863.9 |
| nitroreductase family protein | DWY53_22165 | Not Available | Positive | 4969073 - 4969678 | 23230.9 |
| bifunctional fucokinase/l-fucose-1-p-guanylyltransferase | DWY53_22170 | Not Available | Positive | 4969752 - 4972592 | 105136.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

