Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| moba protein | DWY53_22055 | Not Available | Positive | 4944933 - 4945361 | 16886.5 |
| relaxase | DWY53_22060 | Not Available | Positive | 4945340 - 4946590 | 46772.9 |
| conjugal transfer protein trag | DWY53_22065 | Not Available | Positive | 4946622 - 4948631 | 76829.1 |
| rtec protein | DWY53_22070 | Not Available | Negative | 4948715 - 4949332 | 23900.9 |
| deaminase | DWY53_22075 | Not Available | Negative | 4949572 - 4949994 | 16208.3 |
| sigma-54-dependent fis family transcriptional regulator | DWY53_22080 | Not Available | Negative | 4950274 - 4951596 | 49710.4 |
| hypothetical protein | DWY53_22095 | Not Available | Positive | 4955763 - 4956083 | 11673.2 |
| type iv secretory system conjugative dna transfer family protein | DWY53_22100 | Not Available | Positive | 4956151 - 4957755 | 61220.6 |
| mobilization protein | DWY53_22110 | Not Available | Negative | 4958770 - 4959312 | 20789.3 |
| hypothetical protein | DWY53_22115 | Not Available | Positive | 4959513 - 4959728 | 8007.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

