Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_21990 | Not Available | Positive | 4938092 - 4938289 | 7902.13 |
| Trna-asp | Not Available | Not Available | Positive | 4938267 - 4938340 | Not Available |
| serine protease | DWY53_22000 | Not Available | Positive | 4938759 - 4939802 | 38550.8 |
| hypothetical protein | DWY53_22005 | Not Available | Positive | 4939799 - 4941049 | 47130.2 |
| hypothetical protein | DWY53_22010 | Not Available | Negative | 4941205 - 4941552 | 13166.5 |
| hypothetical protein | DWY53_22015 | Not Available | Negative | 4941703 - 4941915 | 8466.55 |
| hypothetical protein | DWY53_22020 | Not Available | Negative | 4942013 - 4942240 | 8807.38 |
| hypothetical protein | DWY53_22025 | Not Available | Negative | 4942269 - 4942481 | 8188.45 |
| conjugal transfer protein trab | DWY53_22035 | Not Available | Negative | 4942809 - 4943011 | 7552.02 |
| duf3408 domain-containing protein | DWY53_22040 | Not Available | Negative | 4943020 - 4943460 | 16837.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

