Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | DWY53_01945 | Not Available | Negative | 503286 - 504161 | 33007.3 |
| gtra family protein | DWY53_01950 | Not Available | Negative | 504178 - 504567 | 14958.9 |
| hsp20/alpha crystallin family protein | DWY53_01955 | Not Available | Negative | 504961 - 505398 | 16951.0 |
| zn-dependent alcohol dehydrogenase | DWY53_01960 | Not Available | Positive | 505728 - 506774 | 38334.3 |
| rna methyltransferase | DWY53_01965 | Not Available | Positive | 506810 - 507616 | 29085.6 |
| mobilization protein | DWY53_01980 | Not Available | Negative | 508926 - 510329 | 54278.7 |
| dna primase | DWY53_01985 | Not Available | Negative | 510547 - 511503 | 36806.8 |
| duf3853 family protein | DWY53_01995 | Not Available | Negative | 512807 - 513115 | 11312.9 |
| hypothetical protein | DWY53_02000 | Not Available | Negative | 513385 - 513951 | 21837.6 |
| hypothetical protein | DWY53_02005 | Not Available | Negative | 513941 - 514483 | 21526.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

