Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_21935 | Not Available | Negative | 4928426 - 4928863 | 16373.3 |
| dna primase | DWY53_21940 | Not Available | Negative | 4928883 - 4929800 | 34673.2 |
| duf4373 domain-containing protein | DWY53_21945 | Not Available | Negative | 4929957 - 4931051 | 41870.8 |
| atp-dependent helicase | DWY53_21955 | Not Available | Positive | 4932096 - 4933574 | 56150.0 |
| gtp-binding protein | DWY53_21960 | Not Available | Negative | 4933684 - 4934286 | 23034.9 |
| sodium:solute symporter | DWY53_21965 | Not Available | Negative | 4934252 - 4935733 | 55351.7 |
| recombination protein recr | DWY53_21970 | Not Available | Positive | 4935812 - 4936429 | 22458.3 |
| hypothetical protein | DWY53_21975 | Not Available | Positive | 4936450 - 4936920 | 17735.3 |
| n-acetyltransferase | DWY53_21980 | Not Available | Positive | 4936917 - 4937453 | 20476.6 |
| yqge/algh family protein | DWY53_21985 | Not Available | Negative | 4937446 - 4938036 | 22412.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

