Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing protein | DWY53_21825 | Not Available | Positive | 4908963 - 4910258 | 49040.2 |
| 3-oxoacyl-acp synthase | DWY53_21830 | Not Available | Negative | 4910517 - 4911625 | 41624.3 |
| tetr/acrr family transcriptional regulator | DWY53_21835 | Not Available | Negative | 4911630 - 4912253 | 23993.1 |
| pseudohemocyanin | DWY53_21840 | Not Available | Negative | 4912757 - 4913737 | 38530.5 |
| nerd domain-containing protein | DWY53_21845 | Not Available | Negative | 4914057 - 4914608 | 20938.1 |
| atp-binding protein | DWY53_21850 | Not Available | Negative | 4914601 - 4915638 | 39291.3 |
| hypothetical protein | DWY53_21860 | Not Available | Positive | 4916157 - 4916426 | 10773.5 |
| hypothetical protein | DWY53_21865 | Not Available | Negative | 4916731 - 4917567 | 33468.3 |
| fimbrillin family protein | DWY53_21875 | Not Available | Negative | 4921316 - 4921547 | 8541.19 |
| fimbrillin family protein | DWY53_21880 | Not Available | Negative | 4921595 - 4922542 | 33866.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

