Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_21765 | Not Available | Positive | 4896881 - 4897093 | 7881.56 |
| hypothetical protein | DWY53_21770 | Not Available | Positive | 4897112 - 4897321 | 7906.5 |
| prtrc system protein c | DWY53_21780 | Not Available | Positive | 4898384 - 4898605 | 8359.96 |
| abc transporter atp-binding protein | DWY53_21790 | Not Available | Positive | 4899949 - 4900614 | 24550.0 |
| abc transporter permease | DWY53_21795 | Not Available | Positive | 4900658 - 4901950 | 47601.7 |
| abc transporter permease | DWY53_21800 | Not Available | Positive | 4901982 - 4903232 | 48071.8 |
| abc transporter permease | DWY53_21805 | Not Available | Positive | 4903272 - 4904552 | 47792.6 |
| abc transporter permease | DWY53_21810 | Not Available | Positive | 4904556 - 4905827 | 48168.1 |
| tolc family protein | DWY53_21815 | Not Available | Positive | 4906015 - 4907499 | 56980.8 |
| sigma-54-dependent fis family transcriptional regulator | DWY53_21820 | Not Available | Positive | 4907585 - 4908940 | 50734.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

