Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | DWY53_21715 | Not Available | Negative | 4884833 - 4885354 | 20094.9 |
| gnat family n-acetyltransferase | DWY53_21720 | Not Available | Negative | 4885372 - 4885803 | 16263.8 |
| n-acetyltransferase | DWY53_21725 | Not Available | Positive | 4885908 - 4886393 | 18784.7 |
| duf488 family protein | DWY53_21730 | Not Available | Positive | 4886467 - 4886823 | 14248.8 |
| acetyl-coa carboxylase biotin carboxylase subunit | DWY53_21735 | Not Available | Positive | 4887000 - 4888424 | 53749.6 |
| response regulator | DWY53_21740 | Not Available | Positive | 4888468 - 4890660 | 82664.9 |
| sigma-54-dependent fis family transcriptional regulator | DWY53_21745 | Not Available | Positive | 4890641 - 4891960 | 49971.0 |
| duf3945 domain-containing protein | DWY53_21750 | Not Available | Positive | 4892575 - 4894413 | 69767.6 |
| duf4099 domain-containing protein | DWY53_21755 | Not Available | Positive | 4894467 - 4894739 | 9971.09 |
| dna topoisomerase iii | DWY53_21760 | Not Available | Positive | 4894812 - 4896584 | 66298.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

