Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase | DWY53_21610 | Not Available | Positive | 4865647 - 4868037 | 91472.8 |
| carboxynorspermidine decarboxylase | DWY53_21615 | Not Available | Positive | 4868070 - 4869233 | 44398.1 |
| Trna-gly | Not Available | Not Available | Positive | 4869406 - 4869478 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4869526 - 4869609 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4869630 - 4869716 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4869730 - 4869802 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4869850 - 4869930 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4869979 - 4870054 | Not Available |
| glutamine synthetase | DWY53_21650 | Not Available | Negative | 4870175 - 4871677 | 56034.0 |
| gnat family n-acetyltransferase | DWY53_21655 | Not Available | Positive | 4871883 - 4873415 | 59330.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

