Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_21505 | Not Available | Positive | 4841012 - 4841602 | 21754.7 |
| duf2764 domain-containing protein | DWY53_21510 | Not Available | Positive | 4841612 - 4842448 | 32594.0 |
| v-type atp synthase subunit a | DWY53_21515 | Not Available | Positive | 4842467 - 4844221 | 65785.3 |
| v-type atp synthase subunit b | DWY53_21520 | Not Available | Positive | 4844257 - 4845579 | 48182.8 |
| v-type atp synthase subunit d | DWY53_21525 | Not Available | Positive | 4845594 - 4846199 | 23447.8 |
| v-type atp synthase subunit i | DWY53_21530 | Not Available | Positive | 4846196 - 4848001 | 67265.4 |
| v-type atp synthase subunit k | DWY53_21535 | Not Available | Positive | 4848215 - 4848679 | 15421.2 |
| glycosyl transferase | DWY53_21540 | Not Available | Positive | 4848933 - 4850603 | 63540.8 |
| alpha-glucan family phosphorylase | DWY53_21545 | Not Available | Positive | 4850632 - 4853196 | 98180.8 |
| pyridoxal phosphate-dependent aminotransferase | DWY53_21555 | Not Available | Negative | 4854200 - 4855375 | 44758.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

