Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DWY53_01885 | Not Available | Negative | 493130 - 494329 | 44405.6 |
| trkh family potassium uptake protein | DWY53_01890 | Not Available | Positive | 494824 - 496332 | 56391.7 |
| mate family efflux transporter | DWY53_01895 | Not Available | Positive | 496458 - 497819 | 49516.6 |
| rlua family pseudouridine synthase | DWY53_01900 | Not Available | Negative | 497885 - 499507 | 62175.8 |
| hypothetical protein | DWY53_01910 | Not Available | Positive | 500057 - 500263 | 7806.67 |
| hypothetical protein | DWY53_01920 | Not Available | Positive | 500474 - 500947 | 18360.6 |
| mgmt family protein | DWY53_01925 | Not Available | Negative | 500897 - 501250 | 13274.9 |
| nitrous oxide-stimulated promoter family protein | DWY53_01930 | Not Available | Negative | 501256 - 501549 | 11961.9 |
| maoc family dehydratase | DWY53_01935 | Not Available | Positive | 501647 - 502111 | 17689.5 |
| gnat family n-acetyltransferase | DWY53_01940 | Not Available | Negative | 502302 - 503243 | 36101.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

