Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | DWY53_21395 | Not Available | Positive | 4823413 - 4824369 | 36620.4 |
| mobilization protein | DWY53_21400 | Not Available | Positive | 4824580 - 4825983 | 54462.3 |
| hypothetical protein | DWY53_21405 | Not Available | Negative | 4826304 - 4826735 | 16552.4 |
| hypothetical protein | DWY53_21410 | Not Available | Positive | 4827328 - 4827901 | 22396.9 |
| glycoside hydrolase | DWY53_21415 | Not Available | Positive | 4827902 - 4828219 | 12292.0 |
| hypothetical protein | DWY53_21420 | Not Available | Positive | 4828438 - 4829166 | 28157.5 |
| alpha/beta hydrolase | DWY53_21425 | Not Available | Positive | 4829172 - 4829843 | 25001.2 |
| hypothetical protein | DWY53_21430 | Not Available | Positive | 4829849 - 4830475 | 24537.8 |
| lysm domain-containing protein | DWY53_21435 | Not Available | Positive | 4830712 - 4831695 | 37556.6 |
| hypothetical protein | DWY53_21440 | Not Available | Positive | 4831698 - 4831898 | 7883.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

