Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DWY53_21325 | Not Available | Negative | 4805954 - 4806889 | 36310.9 |
| recq family atp-dependent dna helicase | DWY53_21330 | Not Available | Positive | 4807424 - 4812298 | 186357.0 |
| hth domain-containing protein | DWY53_21335 | Not Available | Positive | 4812359 - 4813912 | 58571.7 |
| hypothetical protein | DWY53_21345 | Not Available | Positive | 4814755 - 4814971 | 8541.41 |
| marr family transcriptional regulator | DWY53_21355 | Not Available | Negative | 4816373 - 4816819 | 17085.9 |
| hypothetical protein | DWY53_21360 | Not Available | Positive | 4816919 - 4817635 | 27254.6 |
| fic family protein | DWY53_21370 | Not Available | Negative | 4818038 - 4818847 | 30839.3 |
| recombinase | DWY53_21375 | Not Available | Positive | 4819218 - 4820552 | 52130.6 |
| dna-binding protein | DWY53_21385 | Not Available | Positive | 4821671 - 4821985 | 11936.6 |
| helicase | DWY53_21390 | Not Available | Positive | 4821990 - 4823180 | 46601.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

