Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_21210 | Not Available | Negative | 4786805 - 4786989 | 7245.25 |
| lysozyme | DWY53_21215 | Not Available | Negative | 4787030 - 4787557 | 20288.2 |
| duf3872 domain-containing protein | DWY53_21220 | Not Available | Negative | 4787554 - 4788057 | 19169.8 |
| dna primase | DWY53_21225 | Not Available | Negative | 4788054 - 4788956 | 33727.4 |
| conjugal transfer protein trao | DWY53_21230 | Not Available | Negative | 4788964 - 4789539 | 21037.4 |
| conjugative transposon protein tran | DWY53_21235 | Not Available | Negative | 4789542 - 4790528 | 37189.9 |
| conjugative transposon protein tram | DWY53_21240 | Not Available | Negative | 4790563 - 4791915 | 49068.3 |
| conjugative transposon protein traj | DWY53_21250 | Not Available | Negative | 4792866 - 4793870 | 37157.8 |
| duf4141 domain-containing protein | DWY53_21255 | Not Available | Negative | 4793874 - 4794503 | 24177.4 |
| duf3876 domain-containing protein | DWY53_21260 | Not Available | Negative | 4794527 - 4794907 | 14375.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

