Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_21110 | Not Available | Negative | 4761136 - 4763130 | 78238.1 |
| atp-dependent dna helicase recg | DWY53_21115 | Not Available | Negative | 4763133 - 4764590 | 54715.7 |
| rtec protein | DWY53_21120 | Not Available | Negative | 4764740 - 4765357 | 23879.9 |
| deaminase | DWY53_21125 | Not Available | Negative | 4765568 - 4765981 | 15780.2 |
| sigma-54-dependent fis family transcriptional regulator | DWY53_21130 | Not Available | Negative | 4766261 - 4767583 | 49941.4 |
| hybrid sensor histidine kinase/response regulator | DWY53_21135 | Not Available | Negative | 4767576 - 4769894 | 88209.6 |
| tetracycline resistance ribosomal protection protein | DWY53_21140 | Not Available | Negative | 4769894 - 4771819 | 71991.4 |
| nucleotide sugar dehydrogenase | DWY53_21145 | Not Available | Positive | 4772137 - 4773393 | 47476.6 |
| lipopolysaccharide biosynthesis protein | DWY53_21150 | Not Available | Positive | 4773439 - 4774974 | 57850.8 |
| hypothetical protein | DWY53_21155 | Not Available | Positive | 4774971 - 4776188 | 47623.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

