Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DWY53_21010 | Not Available | Negative | 4738774 - 4739904 | 43083.9 |
| rtec protein | DWY53_21015 | Not Available | Negative | 4740206 - 4740811 | 23243.2 |
| deaminase | DWY53_21020 | Not Available | Negative | 4741050 - 4741472 | 16091.5 |
| hypothetical protein | DWY53_21025 | Not Available | Negative | 4741981 - 4744020 | 79608.3 |
| alpha-l-fucosidase | DWY53_21030 | Not Available | Negative | 4744039 - 4745388 | 51875.6 |
| dna/rna non-specific endonuclease | DWY53_21035 | Not Available | Positive | 4745513 - 4746370 | 32389.9 |
| alpha-n-arabinofuranosidase | DWY53_21040 | Not Available | Negative | 4746460 - 4747983 | 57343.5 |
| hypothetical protein | DWY53_21045 | Not Available | Positive | 4747997 - 4748182 | 7166.81 |
| endolytic transglycosylase mltg | DWY53_21050 | Not Available | Positive | 4748184 - 4749218 | 39590.9 |
| 4fe-4s ferredoxin | DWY53_21055 | Not Available | Negative | 4749257 - 4750036 | 29051.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

