Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4134 domain-containing protein | DWY53_20950 | Not Available | Negative | 4728046 - 4728357 | 10655.1 |
| conjugal transfer protein trad | DWY53_20955 | Not Available | Negative | 4728559 - 4729299 | 27973.8 |
| duf3408 domain-containing protein | DWY53_20960 | Not Available | Negative | 4729296 - 4729658 | 13998.7 |
| duf3408 domain-containing protein | DWY53_20965 | Not Available | Negative | 4729682 - 4730131 | 17005.1 |
| para family protein | DWY53_20970 | Not Available | Negative | 4730137 - 4730892 | 28281.3 |
| hypothetical protein | DWY53_20980 | Not Available | Positive | 4731125 - 4731304 | 6265.64 |
| relaxase | DWY53_20990 | Not Available | Positive | 4732028 - 4733275 | 46565.8 |
| hypothetical protein | DWY53_20995 | Not Available | Positive | 4733306 - 4733369 | 2451.0 |
| conjugal transfer protein trag | DWY53_21000 | Not Available | Positive | 4733380 - 4735371 | 75987.1 |
| ntpase | DWY53_21005 | Not Available | Negative | 4735503 - 4738757 | 124234.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

