Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 4720734 - 4720806 | Not Available |
| Trna-phe | Not Available | Not Available | Positive | 4720987 - 4721062 | Not Available |
| hypothetical protein | DWY53_20910 | Not Available | Negative | 4722905 - 4723099 | 7464.14 |
| hypothetical protein | DWY53_20915 | Not Available | Positive | 4723123 - 4723398 | 10561.3 |
| hypothetical protein | DWY53_20920 | Not Available | Positive | 4723413 - 4723643 | 9117.8 |
| hypothetical protein | DWY53_20925 | Not Available | Positive | 4723654 - 4724663 | 39453.6 |
| hypothetical protein | DWY53_20930 | Not Available | Negative | 4724700 - 4725080 | 14086.2 |
| hypothetical protein | DWY53_20935 | Not Available | Positive | 4725126 - 4725560 | 17017.2 |
| trag family conjugative transposon atpase | DWY53_20940 | Not Available | Negative | 4725629 - 4727706 | 80293.6 |
| duf4133 domain-containing protein | DWY53_20945 | Not Available | Negative | 4727703 - 4728035 | 12600.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

