Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wg repeat-containing protein | DWY53_01825 | Not Available | Positive | 475470 - 477317 | 68549.7 |
| hypothetical protein | DWY53_01830 | Not Available | Positive | 477336 - 478547 | 45890.6 |
| hypothetical protein | DWY53_01835 | Not Available | Positive | 478975 - 479217 | 8901.08 |
| port family protein | DWY53_01840 | Not Available | Positive | 479233 - 480009 | 29108.6 |
| arylsulfatase | DWY53_01850 | Not Available | Negative | 480715 - 482232 | 57821.3 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | DWY53_01860 | Not Available | Negative | 482448 - 485993 | 129303.0 |
| atp-binding protein | DWY53_01865 | Not Available | Negative | 486036 - 487214 | 46146.3 |
| hypothetical protein | DWY53_01870 | Not Available | Positive | 487317 - 488528 | 45667.2 |
| tolc family protein | DWY53_01875 | Not Available | Negative | 488567 - 489940 | 51806.2 |
| multidrug efflux rnd transporter permease subunit | DWY53_01880 | Not Available | Negative | 489962 - 493063 | 113123.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

