Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-diphosphatase | DWY53_20790 | Not Available | Negative | 4699905 - 4700705 | 28480.0 |
| duf3098 domain-containing protein | DWY53_20795 | Not Available | Negative | 4700743 - 4700988 | 9145.44 |
| abc transporter permease | DWY53_20800 | Not Available | Negative | 4701001 - 4701870 | 32622.6 |
| class i sam-dependent methyltransferase | DWY53_20805 | Not Available | Negative | 4701873 - 4702739 | 33272.9 |
| pspc domain-containing protein | DWY53_20810 | Not Available | Positive | 4702907 - 4703143 | 9155.18 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DWY53_20815 | Not Available | Negative | 4703153 - 4703554 | 15118.3 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | DWY53_20820 | Not Available | Negative | 4703554 - 4704924 | 51936.9 |
| hypothetical protein | DWY53_20825 | Not Available | Positive | 4705262 - 4705612 | 13516.5 |
| acetyl-coa hydrolase/transferase family protein | DWY53_20830 | Not Available | Positive | 4705650 - 4707143 | 54010.7 |
| hypothetical protein | DWY53_20840 | Not Available | Positive | 4709704 - 4709982 | 10451.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

